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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs199439 chr17:44793503 A/G LRRC37A4 chr17:43578685-43595516:- -0.6 -9.57 1.4E-15 Box Plot
THYM rs199442 chr17:44820122 G/A LOC644172 chr17:43677491-43679748:- 0.83 8.51 2.48E-13 Box Plot
THYM rs199442 chr17:44820122 G/A LRRC37A4 chr17:43578685-43595516:- -0.45 -7.5 3.33E-11 Box Plot
THYM rs199443 chr17:44819565 C/T LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199443 chr17:44819565 C/T LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199444 chr17:44818276 T/C LOC644172 chr17:43677491-43679748:- 0.83 8.51 2.48E-13 Box Plot
THYM rs199444 chr17:44818276 T/C LRRC37A4 chr17:43578685-43595516:- -0.45 -7.5 3.33E-11 Box Plot
THYM rs199445 chr17:44817408 C/T LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199445 chr17:44817408 C/T LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot
THYM rs199446 chr17:44813169 G/A LOC644172 chr17:43677491-43679748:- -0.82 -8.24 9.36E-13 Box Plot
THYM rs199446 chr17:44813169 G/A LRRC37A4 chr17:43578685-43595516:- 0.46 7.49 3.6E-11 Box Plot
THYM rs199447 chr17:44812188 C/T LOC644172 chr17:43677491-43679748:- 1.11 11.81 2.38E-20 Box Plot
THYM rs199447 chr17:44812188 C/T LRRC37A4 chr17:43578685-43595516:- -0.6 -9.75 5.53E-16 Box Plot
THYM rs199448 chr17:44809001 A/G LOC644172 chr17:43677491-43679748:- 1.12 12.02 8.89E-21 Box Plot
THYM rs199448 chr17:44809001 A/G LRRC37A4 chr17:43578685-43595516:- -0.6 -9.89 2.82E-16 Box Plot